STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_1122HD-GYP domain; Function of strongly homologous gene; enzyme. (592 aa)    
Predicted Functional Partners:
XM1_1121
Dihydrofolate reductase(Dihydrofolate reductase-like domain,1-173); Function of strongly homologous gene; enzyme.
       0.784
XM1_4163
Putative Poly(Beta-D-mannuronate) C5 epimerase 2; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.636
XM1_3055
Putative Adenylate cyclase 1; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.618
XM1_1399
Exopolyphosphatase-like protein; Function of strongly homologous gene; enzyme.
  
   
 0.600
XM1_2436
Protein of unknown function; No homology to any previously reported sequences.
 
     0.581
ubiD
3-octaprenyl-4-hydroxybenzoate decarboxylase（Carboxylyase-related,6-463） Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the UbiD family.
       0.511
XM1_4193
Putative response regulator receiver modulated metal dependent phosphohydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
    0.504
XM1_2568
Putative MCP methyltransferase/methylesterase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
   0.452
XM1_2691
Putative Adenylate cyclase 1; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
     0.433
XM1_2778
Homologs of previously reported genes of unknown function.
  
     0.431
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.