STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_1124Uncharacterized protein; Homologs of previously reported genes of unknown function. (158 aa)    
Predicted Functional Partners:
XM1_2568
Putative MCP methyltransferase/methylesterase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.671
smc
Chromosome partition protein Smc(Structural maintenance of chromosomes protein, prokaryotic,3-1142); Required for chromosome condensation and partitioning. Belongs to the SMC family.
  
 
 0.594
XM1_4518
Protein of unknown function; No homology to any previously reported sequences.
  
    0.587
XM1_4304
Conserved protein of unknown function (Concanavalin A-like lectin/glucanases superfamily; Homologs of previously reported genes of unknown function.
 
  
 0.586
XM1_2652
Putative Phenolpthiocerol synthesis polyketide synthase ppsA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
   
 0.554
XM1_3350
Protein of unknown function; No homology to any previously reported sequences.
  
    0.525
XM1_1125
Putative transposase; Function of strongly homologous gene; enzyme.
       0.524
ubiD
3-octaprenyl-4-hydroxybenzoate decarboxylase（Carboxylyase-related,6-463） Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the UbiD family.
       0.489
XM1_1469
P-type Ca2+ transporter type 2C; Function of strongly homologous gene; transporter.
   
  
 0.476
XM1_2567
Putative HAD superfamily P-type ATPase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
  
 0.476
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.