STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bglABeta-glucosidase A; Function of strongly homologous gene; enzyme. (467 aa)    
Predicted Functional Partners:
bglA3
Beta-glucosidase; Function of strongly homologous gene; enzyme.
  
  
 
0.908
acyP
Acylphosphatase; Function of strongly homologous gene; enzyme.
       0.779
XM1_2591
Exported protein of unknown function; No homology to any previously reported sequences.
  
  
 0.688
melA
Alpha-galactosidase/6-phospho-beta-glucosidase; Function of strongly homologous gene; enzyme.
 
  
 0.634
XM1_1143
Homologs of previously reported genes of unknown function.
       0.542
rpiB
Ribose 5-phosphate epimerase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
  
 0.542
XM1_2220
Putative Phage portal protein, HK97 family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
   0.467
XM1_2436
Protein of unknown function; No homology to any previously reported sequences.
  
   0.428
XM1_4163
Putative Poly(Beta-D-mannuronate) C5 epimerase 2; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
   0.428
XM1_4304
Conserved protein of unknown function (Concanavalin A-like lectin/glucanases superfamily; Homologs of previously reported genes of unknown function.
  
   0.428
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.