STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_1170Homologs of previously reported genes of unknown function. (148 aa)    
Predicted Functional Partners:
XM1_1766
Putative sulfur-carrier protein（TusA-like domain,3-74） Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier; Belongs to the sulfur carrier protein TusA family.
 
  
 0.831
moeB
Molybdopterin synthase sulfurylase; Function of strongly homologous gene; enzyme.
       0.827
XM1_3605
Conserved protein of unknown function(containing TusA-like domain,3-75); Homologs of previously reported genes of unknown function; Belongs to the sulfur carrier protein TusA family.
 
  
 0.794
cysK
Cysteine synthase A, O-acetylserine sulfhydrolase A subunit(Cysteine synthase A,18-316); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
     0.662
XM1_0751
Conserved protein of unknown function （SirA-like domain） Homologs of previously reported genes of unknown function; Belongs to the sulfur carrier protein TusA family.
 
  
 0.605
XM1_1171
Conserved exported protein of unknown function(LTXXQ motif family protein,52-146); Homologs of previously reported genes of unknown function.
 
     0.602
dfp
Fused 4'-phosphopantothenoylcysteine decarboxylase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.
       0.526
dut
Deoxyuridinetriphosphatase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.
       0.525
XM1_1167
Putative Transcriptional regulator(Transcription regulator Rrf2-like,5-131); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
       0.464
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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