STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gyaR-2Glyoxylate reductase(NAD(P)-binding domain,5-118;NAD(P)-binding domain,119-291); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (328 aa)    
Predicted Functional Partners:
XM1_3109
Hydroxypyruvate reductase; Function of strongly homologous gene; enzyme.
 
 0.945
XM1_1373
Putative Citrate lyase beta subunit(Pyruvate/Phosphoenolpyruvate kinase,25-288); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.927
agxt
Serine--pyruvate aminotransferase; Function of strongly homologous gene; enzyme.
  
 
 0.920
XM1_3161
Putative aminotransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.920
glcB
Malate synthase G (fragment); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 
 0.920
cbbZ
Phosphoglycolate phosphatase（2-phosphoglycolate phosphatase, prokaryotic,8-218） Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family.
 
  
 0.916
gyaR
Glycerate dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
  
 
0.909
XM1_2122
Putative Phosphatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
    
  0.902
XM1_3154
Putative Phosphatases; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
    
  0.902
XM1_1173
Homologs of previously reported genes of unknown function.
       0.625
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.