STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_1210Putative Metalloendopeptidase-like membrane protein(Duplicated hybrid moti,68-273); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component. (287 aa)    
Predicted Functional Partners:
XM1_1211
Homologs of previously reported genes of unknown function.
       0.784
XM1_1232
Putative Membrane-bound metallopeptidase（Duplicated hybrid motif,292-496） Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
   
 0.625
XM1_1209
Protein of unknown function; No homology to any previously reported sequences.
       0.579
XM1_1212
Protein of unknown function; No homology to any previously reported sequences.
       0.566
lepB
Signal peptidase I; Function of strongly homologous gene; enzyme; Belongs to the peptidase S26 family.
 
  
 0.545
XM1_1478
Putative Sensor protein gacS(CheY-like superfamily,782-900;905-1026;1045-1177); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
 
 0.482
XM1_0546
Conserved protein of unknown function (contain Soluble lytic murein transglycosylase domain); Homologs of previously reported genes of unknown function.
 
   
 0.473
znuA
High-affinity zinc uptake system protein ZnuA; Function of strongly homologous gene; transporter.
  
  
 0.460
XM1_1213
Conserved protein of unknown function（NAD(P)-binding domain,449-619） Homologs of previously reported genes of unknown function.
       0.444
mrcA
Penicillin-binding protein 1A; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
   
 0.439
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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