Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| XM1_1223 | cobD | XM1_1223 | XM1_1222 | Sirohydrochlorin cobaltochelatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Cobalamin biosynthesis protein CobD(Cobalamin biosynthesis CobD/CbiB,16-315); Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. | 0.662 |
| XM1_1223 | cobH | XM1_1223 | XM1_1224 | Sirohydrochlorin cobaltochelatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Precorrin-8X/cobalt-precorrin-8 methylmutase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.950 |
| XM1_1223 | cobI | XM1_1223 | XM1_1226 | Sirohydrochlorin cobaltochelatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Precorrin-2/cobalt-factor-2 C20-methyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the precorrin methyltransferase family. | 0.992 |
| XM1_1223 | cobJ | XM1_1223 | XM1_1227 | Sirohydrochlorin cobaltochelatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Uncharacterized protein; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.974 |
| XM1_1223 | cobL | XM1_1223 | XM1_1225 | Sirohydrochlorin cobaltochelatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | TP_methylase domain-containing protein; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.931 |
| XM1_1223 | cobM | XM1_1223 | XM1_0163 | Sirohydrochlorin cobaltochelatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Precorrin-4 C(11)-methyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.620 |
| cobB | cobB-3 | XM1_0159 | XM1_1840 | Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | Cobyrinic acid A,C-diamide synthase（Cobyrinic acid a,c-diamide synthase CbiA,10-456） Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | 0.919 |
| cobB | cobD | XM1_0159 | XM1_1222 | Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | Cobalamin biosynthesis protein CobD(Cobalamin biosynthesis CobD/CbiB,16-315); Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. | 0.853 |
| cobB | cobH | XM1_0159 | XM1_1224 | Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | Precorrin-8X/cobalt-precorrin-8 methylmutase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.990 |
| cobB | cobI | XM1_0159 | XM1_1226 | Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | Precorrin-2/cobalt-factor-2 C20-methyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the precorrin methyltransferase family. | 0.852 |
| cobB | cobJ | XM1_0159 | XM1_1227 | Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | Uncharacterized protein; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.955 |
| cobB | cobK | XM1_0159 | XM1_3454 | Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | Precorrin-6A reductase; Function of strongly homologous gene; enzyme. | 0.836 |
| cobB | cobL | XM1_0159 | XM1_1225 | Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | TP_methylase domain-containing protein; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.916 |
| cobB | cobM | XM1_0159 | XM1_0163 | Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | Precorrin-4 C(11)-methyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.953 |
| cobB | cobQ | XM1_0159 | XM1_1221 | Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | Cobyric acid synthase(Cobyric acid synthase CobQ,7-475); Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. | 0.959 |
| cobB-3 | cobB | XM1_1840 | XM1_0159 | Cobyrinic acid A,C-diamide synthase（Cobyrinic acid a,c-diamide synthase CbiA,10-456） Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | 0.919 |
| cobB-3 | cobD | XM1_1840 | XM1_1222 | Cobyrinic acid A,C-diamide synthase（Cobyrinic acid a,c-diamide synthase CbiA,10-456） Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | Cobalamin biosynthesis protein CobD(Cobalamin biosynthesis CobD/CbiB,16-315); Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. | 0.847 |
| cobB-3 | cobH | XM1_1840 | XM1_1224 | Cobyrinic acid A,C-diamide synthase（Cobyrinic acid a,c-diamide synthase CbiA,10-456） Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | Precorrin-8X/cobalt-precorrin-8 methylmutase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.989 |
| cobB-3 | cobI | XM1_1840 | XM1_1226 | Cobyrinic acid A,C-diamide synthase（Cobyrinic acid a,c-diamide synthase CbiA,10-456） Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | Precorrin-2/cobalt-factor-2 C20-methyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the precorrin methyltransferase family. | 0.817 |
| cobB-3 | cobJ | XM1_1840 | XM1_1227 | Cobyrinic acid A,C-diamide synthase（Cobyrinic acid a,c-diamide synthase CbiA,10-456） Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | Uncharacterized protein; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.929 |
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