STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccrCrotonyl-CoA reductase; Function of strongly homologous gene; enzyme. (418 aa)    
Predicted Functional Partners:
phaJ
(R)-specific enoyl-CoA hydratase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 0.936
XM1_3385
Methylmalonyl-CoA/ethylmalonyl-CoA epimerase; Function of strongly homologous gene; enzyme.
   
 0.924
mmgC
(2S)-methylsuccinyl-CoA dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 
 0.920
XM1_1238
Ethylmalonyl-CoA mutase; Function of strongly homologous gene; enzyme.
 
   
 0.884
XM1_1405
Putative Dehydratase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.819
XM1_1373
Putative Citrate lyase beta subunit(Pyruvate/Phosphoenolpyruvate kinase,25-288); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.775
XM1_2652
Putative Phenolpthiocerol synthesis polyketide synthase ppsA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.774
XM1_1406
Putative Citrate lyase beta subunit(Pyruvate/Phosphoenolpyruvate kinase,3-234); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.524
XM1_4491
Putative quinone oxidoreductase-like protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.506
XM1_1239
Protein of unknown function; No homology to any previously reported sequences.
       0.452
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
Server load: medium (58%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.