STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_1241Putative Small-conductance mechanosensitive channel (Mechanosensitive ion channel MscS,211-410); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (421 aa)    
Predicted Functional Partners:
XM1_0658
Putative cation/proton antiporter, Na+/H+ exchanger family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
  
 0.613
yfgD
oxidoreductase（Arsenate reductase,5-115） Function of strongly homologous gene; enzyme.
       0.590
XM1_4348
Glutathione-regulated potassium-efflux system protein kefB; Function of strongly homologous gene; transporter; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
  
  
 0.491
ybaL
Nner membrane protein YbaL; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
  
  
 0.428
XM1_1478
Putative Sensor protein gacS(CheY-like superfamily,782-900;905-1026;1045-1177); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
     
 0.417
XM1_0218
Putative Outer membrane protein A; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.
     
 0.415
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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