STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_1255Homologs of previously reported genes of unknown function. (204 aa)    
Predicted Functional Partners:
ctrA
Two-component cell cycle transcriptional regulator ctrA; Function of strongly homologous gene; regulator.
  
 0.959
XM1_0200
Signal transduction histidine kinase; Function of strongly homologous gene; enzyme.
  
 0.955
XM1_1478
Putative Sensor protein gacS(CheY-like superfamily,782-900;905-1026;1045-1177); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
   
 
 0.728
cheY
Chemotaxis protein CheY（CheY-like superfamily,1-118） Function of homologous gene experimentally demonstrated in an other organism; regulator.
 
 
 0.693
XM1_0735
Putative Cell division protein （cell division ABC transporter FtsX fragment） Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
     0.692
XM1_1262
Putative Serine phosphatase RsbU(GAF domain,29-176;Protein phosphatase 2C-like,228-414); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
    0.687
XM1_1966
Conserved protein of unknown function(Uncharacterised domain UPF0070, N-terminal,21-63); Homologs of previously reported genes of unknown function.
  
     0.671
XM1_1258
ABC-type transport system; Function of strongly homologous gene; transporter.
 
     0.664
XM1_2061
Putative Signal transduction histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.652
XM1_4027
Putative response regulator receiver modulated diguanylate cyclase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.641
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.