STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_1265Putative hydrolase or acyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (264 aa)    
Predicted Functional Partners:
dnaA
Chromosomal replication initiator protein DnaA, DNA-binding transcriptional dual regulator; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
  
   
 0.740
XM1_2652
Putative Phenolpthiocerol synthesis polyketide synthase ppsA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.734
XM1_1266
Putative Glycosyltransferase(Glycosyl transferase, family 1,201-364); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.678
XM1_1267
Putative ADP-heptose of LPS heptosyltransferase（Glycosyl transferase, family 9,73-282） Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.660
XM1_0074
Putative 60 kDa SS-A/Ro ribonucleoprotein homolog; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.
  
     0.603
XM1_1264
Homologs of previously reported genes of unknown function.
       0.590
thrS
threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).
       0.548
XM1_3133
Conserved hypothetical protein(containing Ubiquinol-cytochrome c chaperone, CBP3 domain,9-184); Homologs of previously reported genes of unknown function.
  
     0.528
XM1_0611
Homologs of previously reported genes of unknown function.
    
 0.522
XM1_2325
Homologs of previously reported genes of unknown function.
    
 0.522
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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