STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_1310Putative FOG: PAS/PAC domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure. (174 aa)    
Predicted Functional Partners:
XM1_1311
Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
 
   0.836
XM1_4106
Methyl-accepting chemotaxis protein; Function of strongly homologous gene; regulator.
 
   0.664
XM1_3643
Methyl-accepting chemotaxis protein; Function of strongly homologous gene; regulator.
 
   0.642
XM1_2988
Putative methyl-accepting chemotaxis protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
 
   0.567
XM1_2383
Putative Methyl-accepting chemotaxis protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
 
   0.563
gpsA
Glycerol-3-phosphate dehydrogenase [NAD(P)+]; Function of strongly homologous gene; enzyme; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
       0.547
XM1_1309
Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
 
 0.542
XM1_1313
Putative Surface antigen; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.
       0.542
XM1_2505
Methyl-accepting chemotaxis protein (MCP); Function of strongly homologous gene; putative receptor.
 
   0.506
XM1_2061
Putative Signal transduction histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.461
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.