STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_1318Putative Response regulator（GGDEF domain,147-323） Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (332 aa)    
Predicted Functional Partners:
XM1_2133
Predicted Signal transduction protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
 0.959
XM1_0118
Putative Metal-dependent phosphohydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
    0.947
XM1_1658
Putative metal dependent phosphohydrolase(HD domain,227-389); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.925
rpfG
Cyclic di-GMP phosphodiesterase response regulator RpfG; Function of strongly homologous gene; regulator.
 
    0.920
XM1_3258
Putative response regulator rpfG; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
    0.916
XM1_4032
Putative response regulator rpfG; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
    0.900
XM1_2920
Putative response regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
   0.880
XM1_4659
Putative Response regulator receiver sensor signal transduction histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
 
 0.871
XM1_4197
Signal transduction histidine kinase, homodimeric 12-203; ATPase-like, ATP-binding domain 268-373); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
 
 0.868
phoB
Two-component system, OmpR family, phosphate regulon response regulator PhoB; Function of homologous gene experimentally demonstrated in an other organism; regulator.
 
 
    0.860
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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