STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_1360Putative Type IV pili component(Pilus biogenesis CpaD-related,10-203); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component. (228 aa)    
Predicted Functional Partners:
cpaE
Flp pilus assembly protein, ATPase CpaE; Function of strongly homologous gene; transporter.
 
     0.951
XM1_1357
Prepilin peptidase CpaA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.931
XM1_1358
Putative flp pilus assembly CpaB (Pilus assembly, Flp-type CpaB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
     0.931
XM1_1359
Putative Flp pilus assembly protein, secretin CpaC(Type II/III secretion system,280-441); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure; Belongs to the bacterial secretin family.
 
   
 0.914
XM1_1363
Putative Flp pilus assembly protein TadB(Type II secretion system F domain,164-287); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.
 
     0.912
XM1_1364
Putative Flp pilus assembly protein TadC; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.
 
     0.896
XM1_1362
Flp pilus assembly protein, ATPase CpaF(Type II secretion system protein E,108-384); Function of strongly homologous gene; enzyme.
 
   
 0.870
XM1_1367
Putative TadE-like protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.
 
     0.786
XM1_1368
Homologs of previously reported genes of unknown function; putative membrane component.
 
     0.786
XM1_1366
Homologs of previously reported genes of unknown function.
 
   
 0.776
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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