STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_1371Iron(III)-transport system ATP-binding protein; Function of strongly homologous gene; transporter; Belongs to the ABC transporter superfamily. (353 aa)    
Predicted Functional Partners:
XM1_1370
Iron(III) transport system permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.992
fbpA
Iron(III) ABC transporter, periplasmic iron(III)-binding protein; Function of strongly homologous gene; transporter.
 
 
 0.981
potH
Putrescine transporter subunit: membrane component of ABC superfamily; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
 0.938
potI
Putrescine transporter subunit: membrane component of ABC superfamily; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
  
 0.863
potF
Putrescine transporter subunit: periplasmic-binding component of ABC superfamily; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
  
 0.764
XM1_0260
Putative Spermidine/putrescine-binding periplasmic protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
  
 0.762
XM1_1080
Putative ABC-type multidrug transport system; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
   
  0.686
modB
Molybdate transporter subunit (membrane component of ABC superfamily); Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
  
 0.627
XM1_4544
Putative ABC transporter, periplasmic binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
  
 0.511
XM1_1367
Putative TadE-like protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.
       0.500
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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