STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_1435Conserved protein of unknown function(Uncharacterised protein family UPF0145,27-132) Homologs of previously reported genes of unknown function; Belongs to the UPF0145 family. (133 aa)    
Predicted Functional Partners:
flgH
Flagellar L-ring protein flgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
   
    0.635
mogA
Molybdochelatase MogA, involved in Moco biosynthesis(Molybdopterin binding,4-160) Function of homologous gene experimentally demonstrated in an other organism; factor.
  
    0.588
XM1_1434
Conserved exported protein of unknown function (Extensin-like, C-terminal; Homologs of previously reported genes of unknown function.
       0.527
rpsT
30S ribosomal protein S20; Binds directly to 16S ribosomal RNA.
   
    0.406
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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