STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_1447Putative Superfamily protein(Phosphatidic acid phosphatase/chloroperoxidase, N-terminal,42-233); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process. (240 aa)    
Predicted Functional Partners:
XM1_1448
Putative Permease(Permease YjgP/YjgQ, predicted10,358); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.849
XM1_1098
Membrane-associated phospholipid phosphatase; Function of strongly homologous gene; enzyme.
 
  
 0.577
pduO
Corrinoid adenosyltransferase; Function of strongly homologous gene; enzyme; Belongs to the Cob(I)alamin adenosyltransferase family.
       0.567
XM1_1445
Cold shock protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
 
     0.565
argG
Argininosuccinate synthase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
      0.502
XM1_4713
Conserved protein of unknown function (Flagellar FlaF 15-111); Homologs of previously reported genes of unknown function.
  
     0.448
XM1_0824
Homologs of previously reported genes of unknown function.
  
     0.427
XM1_2443
Putative Response regulator (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
     0.416
XM1_1659
Putative ATPase(Domain of unknown function DUF87,16-120); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.406
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.