Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| XM1_1547 | cobB | XM1_1547 | XM1_0159 | Aminotransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | 0.632 |
| XM1_1547 | cobB-3 | XM1_1547 | XM1_1840 | Aminotransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Cobyrinic acid A,C-diamide synthase（Cobyrinic acid a,c-diamide synthase CbiA,10-456） Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | 0.514 |
| XM1_1547 | cobD | XM1_1547 | XM1_1222 | Aminotransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Cobalamin biosynthesis protein CobD(Cobalamin biosynthesis CobD/CbiB,16-315); Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. | 0.981 |
| XM1_1547 | cobO | XM1_1547 | XM1_0769 | Aminotransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Cob(I)yrinic acid a,c-diamide adenosyltransferase; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids. | 0.961 |
| XM1_1547 | cobQ | XM1_1547 | XM1_1221 | Aminotransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Cobyric acid synthase(Cobyric acid synthase CobQ,7-475); Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. | 0.993 |
| XM1_1547 | cobS | XM1_1547 | XM1_0135 | Aminotransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Putative type I secretion membrane fusion protein, HlyD family; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. | 0.668 |
| XM1_1547 | cobU | XM1_1547 | XM1_0704 | Aminotransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase; Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate. | 0.973 |
| XM1_1547 | pduO | XM1_1547 | XM1_1449 | Aminotransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Corrinoid adenosyltransferase; Function of strongly homologous gene; enzyme; Belongs to the Cob(I)alamin adenosyltransferase family. | 0.916 |
| cobB | XM1_1547 | XM1_0159 | XM1_1547 | Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | Aminotransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.632 |
| cobB | cobB-3 | XM1_0159 | XM1_1840 | Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | Cobyrinic acid A,C-diamide synthase（Cobyrinic acid a,c-diamide synthase CbiA,10-456） Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | 0.919 |
| cobB | cobD | XM1_0159 | XM1_1222 | Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | Cobalamin biosynthesis protein CobD(Cobalamin biosynthesis CobD/CbiB,16-315); Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. | 0.853 |
| cobB | cobN | XM1_0159 | XM1_0706 | Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | Aerobic cobaltochelatase subunit CobN; Function of strongly homologous gene; enzyme. | 0.977 |
| cobB | cobO | XM1_0159 | XM1_0769 | Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | Cob(I)yrinic acid a,c-diamide adenosyltransferase; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids. | 0.962 |
| cobB | cobQ | XM1_0159 | XM1_1221 | Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | Cobyric acid synthase(Cobyric acid synthase CobQ,7-475); Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. | 0.959 |
| cobB | cobS | XM1_0159 | XM1_0135 | Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | Putative type I secretion membrane fusion protein, HlyD family; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. | 0.795 |
| cobB | cobT-2 | XM1_0159 | XM1_1438 | Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | Aerobic cobaltochelatase subunit CobT(Cobalt chelatase, CobT subunit,19-618); Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.900 |
| cobB | cobU | XM1_0159 | XM1_0704 | Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | Adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase; Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate. | 0.867 |
| cobB | pduO | XM1_0159 | XM1_1449 | Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | Corrinoid adenosyltransferase; Function of strongly homologous gene; enzyme; Belongs to the Cob(I)alamin adenosyltransferase family. | 0.912 |
| cobB-3 | XM1_1547 | XM1_1840 | XM1_1547 | Cobyrinic acid A,C-diamide synthase（Cobyrinic acid a,c-diamide synthase CbiA,10-456） Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | Aminotransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.514 |
| cobB-3 | cobB | XM1_1840 | XM1_0159 | Cobyrinic acid A,C-diamide synthase（Cobyrinic acid a,c-diamide synthase CbiA,10-456） Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | 0.919 |
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