STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_1463Homologs of previously reported genes of unknown function. (141 aa)    
Predicted Functional Partners:
XM1_1464
Conserved protein of unknown function(RmlC-like jelly roll fold, 3-114); Homologs of previously reported genes of unknown function.
       0.784
nadB
Quinolinate synthase, L-aspartate oxidase (B protein) subunit(L-aspartate oxidase,8-515); Catalyzes the oxidation of L-aspartate to iminoaspartate.
       0.749
nadC
Quinolinate phosphoribosyltransferase(Nicotinate-nucleotide pyrophosphorylase,16-282); Function of strongly homologous gene; enzyme; Belongs to the NadC/ModD family.
       0.749
nadA
Quinolinate synthase, subunit A(Quinolinate synthetase A,26-326); Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.
       0.749
XM1_1468
Putative CheY-like receiver protein(CheY-like superfamily,18-141); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
       0.486
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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