XM1_1471 protein (Magnetospirillum sp. XM1) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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Coexpression

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[Homology]

Score

XM1_1471

Homologs of previously reported genes of unknown function. (117 aa)

Predicted Functional Partners:

XM1_1473

0.842

pyrD

0.828

yumC

0.762

XM1_1469

0.509

XM1_1470

0.509

Your Current Organism:

Magnetospirillum sp. XM1

NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
XM1_1469	XM1_1470	XM1_1469	XM1_1470	P-type Ca2+ transporter type 2C; Function of strongly homologous gene; transporter.	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.	0.839
XM1_1469	XM1_1471	XM1_1469	XM1_1471	P-type Ca2+ transporter type 2C; Function of strongly homologous gene; transporter.	Homologs of previously reported genes of unknown function.	0.509
XM1_1469	XM1_1473	XM1_1469	XM1_1473	P-type Ca2+ transporter type 2C; Function of strongly homologous gene; transporter.	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.511
XM1_1469	pyrD	XM1_1469	XM1_1472	P-type Ca2+ transporter type 2C; Function of strongly homologous gene; transporter.	Dihydro-orotate oxidase, FMN-linked（Aldolase-type TIM barrel,5-351） Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.	0.530
XM1_1469	yumC	XM1_1469	XM1_1474	P-type Ca2+ transporter type 2C; Function of strongly homologous gene; transporter.	Ferredoxin--NADP reductase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.	0.531
XM1_1470	XM1_1469	XM1_1470	XM1_1469	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.	P-type Ca2+ transporter type 2C; Function of strongly homologous gene; transporter.	0.839
XM1_1470	XM1_1471	XM1_1470	XM1_1471	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.	Homologs of previously reported genes of unknown function.	0.509
XM1_1470	XM1_1473	XM1_1470	XM1_1473	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.511
XM1_1470	pyrD	XM1_1470	XM1_1472	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.	Dihydro-orotate oxidase, FMN-linked（Aldolase-type TIM barrel,5-351） Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.	0.523
XM1_1470	yumC	XM1_1470	XM1_1474	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.	Ferredoxin--NADP reductase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.	0.503
XM1_1471	XM1_1469	XM1_1471	XM1_1469	Homologs of previously reported genes of unknown function.	P-type Ca2+ transporter type 2C; Function of strongly homologous gene; transporter.	0.509
XM1_1471	XM1_1470	XM1_1471	XM1_1470	Homologs of previously reported genes of unknown function.	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.	0.509
XM1_1471	XM1_1473	XM1_1471	XM1_1473	Homologs of previously reported genes of unknown function.	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.842
XM1_1471	pyrD	XM1_1471	XM1_1472	Homologs of previously reported genes of unknown function.	Dihydro-orotate oxidase, FMN-linked（Aldolase-type TIM barrel,5-351） Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.	0.828
XM1_1471	yumC	XM1_1471	XM1_1474	Homologs of previously reported genes of unknown function.	Ferredoxin--NADP reductase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.	0.762
XM1_1473	XM1_1469	XM1_1473	XM1_1469	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	P-type Ca2+ transporter type 2C; Function of strongly homologous gene; transporter.	0.511
XM1_1473	XM1_1470	XM1_1473	XM1_1470	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.	0.511
XM1_1473	XM1_1471	XM1_1473	XM1_1471	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Homologs of previously reported genes of unknown function.	0.842
XM1_1473	pyrD	XM1_1473	XM1_1472	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Dihydro-orotate oxidase, FMN-linked（Aldolase-type TIM barrel,5-351） Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.	0.829
XM1_1473	yumC	XM1_1473	XM1_1474	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Ferredoxin--NADP reductase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.	0.773