STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_1489Putative Membrane protein related to metalloendopeptidase(Duplicated hybrid motif,276-408); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (418 aa)    
Predicted Functional Partners:
XM1_1488
Putative cell shape determination protein CcmA(Protein of unknown function DUF583,29-123); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process.
 
   
 0.893
XM1_1487
Magnesium transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
       0.782
XM1_0156
Putative penicillin-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
   
 0.700
mrcA
Penicillin-binding protein 1A; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
   
 0.616
XM1_1490
Homologs of previously reported genes of unknown function.
       0.558
XM1_1492
Homologs of previously reported genes of unknown function.
     
 0.557
lepB
Signal peptidase I; Function of strongly homologous gene; enzyme; Belongs to the peptidase S26 family.
 
  
 0.553
XM1_1491
Homologs of previously reported genes of unknown function.
       0.547
secF
Protein translocase subunit SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.
 
   
 0.527
mltG
Putative aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.
 
   
 0.507
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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