STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_1531Conserved protein of unknown function (Flagellin, D0/D1 domain); Homologs of previously reported genes of unknown function. (712 aa)    
Predicted Functional Partners:
XM1_1532
Putative Flagellar hook-associated protein(Flagellar hook-associated protein, FlgK,7-365); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure; Belongs to the flagella basal body rod proteins family.
 
  
 0.992
XM1_3712
Flagellar capping protein; Function of strongly homologous gene; structure.
 
 
 0.935
czcA-2
Putative Flagellar hook protein FlgE; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.
 
  
 0.929
XM1_1534
Putative flagellar protein FlgJ, N-terminal(Flagellar protein FlgJ, N-terminal,51-98); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.
 
  
 0.919
flgI
Flagellar basal body P-ring protein(Flagellar P-ring protein,41-391); Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
  
  
 0.913
czcB-3
Putative Flagellar hook capping protein flgD; Required for flagellar hook formation. May act as a scaffolding protein.
 
 
 0.905
flgB
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
 
 0.892
XM1_2568
Putative MCP methyltransferase/methylesterase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.864
XM1_4713
Conserved protein of unknown function (Flagellar FlaF 15-111); Homologs of previously reported genes of unknown function.
 
  
 0.862
XM1_2915
Homologs of previously reported genes of unknown function.
  
 
 0.840
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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