STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_1533Conserved protein of unknown function (FlgN-like domain,32-148); Homologs of previously reported genes of unknown function. (166 aa)    
Predicted Functional Partners:
XM1_1534
Putative flagellar protein FlgJ, N-terminal(Flagellar protein FlgJ, N-terminal,51-98); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.
       0.828
flgI
Flagellar basal body P-ring protein(Flagellar P-ring protein,41-391); Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
       0.827
XM1_1532
Putative Flagellar hook-associated protein(Flagellar hook-associated protein, FlgK,7-365); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure; Belongs to the flagella basal body rod proteins family.
       0.751
XM1_1531
Conserved protein of unknown function (Flagellin, D0/D1 domain); Homologs of previously reported genes of unknown function.
       0.703
XM1_1536
Putative Flagellar assembly regulator FliX(Flagellar assembly regulator FliX, class II,1-141); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
       0.553
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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