STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_1548Conserved protein of unknown function (Flagellar FlaF,17-119); Homologs of previously reported genes of unknown function. (126 aa)    
Predicted Functional Partners:
XM1_1262
Putative Serine phosphatase RsbU(GAF domain,29-176;Protein phosphatase 2C-like,228-414); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
    0.856
XM1_4394
Putative serine phosphatase RsbU, regulator of sigma subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
    0.856
XM1_1530
Putative flagellum biosynthesis repressor protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
  
 0.758
XM1_4717
Flagellin and related hook-associated protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
  
 0.748
XM1_1532
Putative Flagellar hook-associated protein(Flagellar hook-associated protein, FlgK,7-365); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure; Belongs to the flagella basal body rod proteins family.
  
  
 0.668
fliG
Putative metal dependent phosphohydrolase; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
  
  
 0.625
XM1_1906
Uncharacterized protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
    0.570
XM1_1549
Putative O-linked N-acetylglucosamine transferase(Tetratricopeptide-like helical,8-157); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
     
 0.566
XM1_1358
Putative flp pilus assembly CpaB (Pilus assembly, Flp-type CpaB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
   
    0.553
flgB
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
  
  
 0.529
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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