STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_1551Perosamine synthetase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the DegT/DnrJ/EryC1 family. (439 aa)    
Predicted Functional Partners:
XM1_0954
Putative pyridoxal phosphate-dependent aminotransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 
0.928
XM1_1552
Putative Dehydrogenase(NAD(P)-binding domain,5-174); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.897
XM1_1553
Putative acylneuraminate cytidylyltransferase(Acylneuraminate cytidylyltransferase,4-205); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.851
XM1_1550
Conserved protein of unknown function(Acyl-CoA N-acyltransferase,147-319); Homologs of previously reported genes of unknown function.
       0.784
XM1_0984
Putative NAD(P)-dependent oxidoreductase, GFO/IDH/MOCA family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 0.719
XM1_0993
Putative acetyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 0.667
XM1_1032
Putative dehydrogenase and related protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 0.640
kdsD
D-arabinose 5-phosphate isomerase（Sugar isomerase (SIS),46-171） Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the SIS family. GutQ/KpsF subfamily.
  
 
 0.622
XM1_0916
Conserved protein of unknown function （RmlC-like cupin domain） Homologs of previously reported genes of unknown function.
 
  
 0.602
XM1_1006
Predicted nucleoside-diphosphate sugar epimerase; Function of strongly homologous gene; enzyme.
 
  
 0.590
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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