STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_1648Putative Cell wall biosynthesis glycosyltransferase(Glycosyl transferase, family 2,5-165); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (318 aa)    
Predicted Functional Partners:
XM1_0414
Putative Glycosyltransferase involved in cell wall biogenesis; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 
0.916
XM1_1011
Putative glycosyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.613
holC
DNA polymerase III subunit chi; Function of strongly homologous gene; enzyme.
       0.569
XM1_1019
Putative glycosyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.466
XM1_1018
Putative glycosyltransferase (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.454
XM1_0982
dTDP-4-dehydrorhamnose 3,5-epimerase and related enzyme; Function of strongly homologous gene; enzyme.
 
  
 0.414
XM1_1025
Glycosyltransferase; Function of strongly homologous gene; enzyme.
 
 
 0.414
XM1_0983
Glycosyltransferase; Function of strongly homologous gene; enzyme.
 
     0.407
rkpK
UDP-glucose 6-dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.402
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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