STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_1659Putative ATPase(Domain of unknown function DUF87,16-120); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (520 aa)    
Predicted Functional Partners:
phnA
Alkylphosphonate uptake protein (PhnA) in phosphonate metabolism(PhnA protein,7-116); Function of homologous gene experimentally demonstrated in an other organism; transporter.
       0.648
XM1_3659
Putative Translation initiation factor IF-2; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
     0.633
XM1_1658
Putative metal dependent phosphohydrolase(HD domain,227-389); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.613
XM1_1657
Homologs of previously reported genes of unknown function.
       0.592
XM1_3134
Protein of unknown function; No homology to any previously reported sequences.
 
     0.570
XM1_0374
Putative transcriptional regulator, MarR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
     0.472
XM1_2083
Homologs of previously reported genes of unknown function.
 
    0.443
XM1_1098
Membrane-associated phospholipid phosphatase; Function of strongly homologous gene; enzyme.
 
     0.407
XM1_1447
Putative Superfamily protein(Phosphatidic acid phosphatase/chloroperoxidase, N-terminal,42-233); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process.
  
     0.406
XM1_1656
Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
       0.402
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.