STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_1669Conserved protein of unknown function(Haemerythrin-like, metal-binding,1-130); Homologs of previously reported genes of unknown function. (500 aa)    
Predicted Functional Partners:
XM1_0354
Conserved protein of unknown function （Hemerythrin-like iron-binding protein） Homologs of previously reported genes of unknown function.
 
     0.776
XM1_0550
Conserved protein of unknown function （Haemerythrin-like, metal-binding） Homologs of previously reported genes of unknown function.
  
     0.767
XM1_0458
Putative Bacteriohemerythrin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
     0.765
XM1_2135
Hemerythrin-like protein; Homologs of previously reported genes of unknown function.
  
     0.711
XM1_4506
Hemerythrin-like metal-binding protein; Function of strongly homologous gene; transporter.
  
     0.562
lysS
Lysine--tRNA ligase; Function of strongly homologous gene; enzyme; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.545
XM1_1275
Conserved protein of unknown function（NERD,16-109） Homologs of previously reported genes of unknown function.
  
     0.536
XM1_1670
Homologs of previously reported genes of unknown function.
       0.536
XM1_0992
Conserved protein of unknown function (FMN-binding split barrel-related 28-245; Homologs of previously reported genes of unknown function.
  
     0.535
XM1_4304
Conserved protein of unknown function (Concanavalin A-like lectin/glucanases superfamily; Homologs of previously reported genes of unknown function.
  
     0.529
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.