STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_1674Conserved protein of unknown function(Uncharacterised peroxidase-related,10-185); Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. (191 aa)    
Predicted Functional Partners:
XM1_1676
Putative thioesterase family protein(Phenylacetic acid degradation-related domain,24-124); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
   
 0.780
XM1_1673
Putative 5'-nucleotidase/2',3'-cyclic phosphodiesterase(5'-Nucleotidase/apyrase,1-494); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the 5'-nucleotidase family.
       0.779
XM1_1675
Putative GGDEF domain(GGDEF domain,422-606); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.
       0.726
XM1_1681
Putative Phenylacetate-CoA ligase(AMP-dependent synthetase/ligase,116-276); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
   
 0.625
XM1_1677
Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
     
 0.532
XM1_2547
Putative Indolepyruvate ferredoxin oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.530
mmgC-2
Short chain acyl-CoA dehydrogenase(Acyl-CoA dehydrogenase/oxidase,3-240); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
  
 0.520
XM1_2913
Putative indole pyruvate ferredoxin/flavodoxin oxidoreductase subunit iorA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
   
 0.504
XM1_0908
Putative adenylyl-sulfate kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
    0.481
cysC
Adenylylsulphate kinase; Catalyzes the synthesis of activated sulfate.
   
    0.481
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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