STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_1686Putative Long-chain acyl-CoA synthetase(AMP-dependent synthetase/ligase,42-497); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (643 aa)    
Predicted Functional Partners:
XM1_1687
Branched-chain amino acid transport system ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
    0.962
XM1_1684
Putative bacterial inner-membrane translocator(ABC transporter, permease,50-300); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the binding-protein-dependent transport system permease family.
 
    0.950
XM1_1685
Putative bacterial inner-membrane translocator(ABC transporter, permease,10-280); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the binding-protein-dependent transport system permease family.
 
    0.946
XM1_3679
Putative long-chain-fatty-acid--CoA ligase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 
0.922
XM1_1683
Putative ABC-type branched-chain amino acid transport systems, periplasmic component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
    0.918
XM1_3410
Putative AMP-dependent synthetase and ligase; Function of strongly homologous gene; enzyme.
 
0.917
livF
Leucine/isoleucine/valine transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
    0.850
XM1_1681
Putative Phenylacetate-CoA ligase(AMP-dependent synthetase/ligase,116-276); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
    0.840
XM1_0405
Putative lysophospholipase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
    
 0.812
XM1_2652
Putative Phenolpthiocerol synthesis polyketide synthase ppsA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
 
 0.737
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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