STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_1704Homologs of previously reported genes of unknown function. (208 aa)    
Predicted Functional Partners:
XM1_4163
Putative Poly(Beta-D-mannuronate) C5 epimerase 2; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.739
XM1_3055
Putative Adenylate cyclase 1; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.686
XM1_2691
Putative Adenylate cyclase 1; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.588
XM1_1705
Homologs of previously reported genes of unknown function.
       0.547
XM1_1846
Putative Adenylate cyclase 1(Adenylyl cyclase class-3/4/guanylyl cyclase,482-667); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.528
divK-2
Polar-differentiation response regulator DivK(CheY-like superfamily,26-144); Function of homologous gene experimentally demonstrated in an other organism; regulator.
       0.506
XM1_1837
Homologs of previously reported genes of unknown function.
 
     0.456
XM1_3034
PBPb domain-containing protein; Homologs of previously reported genes of unknown function.
  
     0.449
XM1_4506
Hemerythrin-like metal-binding protein; Function of strongly homologous gene; transporter.
  
     0.407
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.