STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
divK-2Polar-differentiation response regulator DivK(CheY-like superfamily,26-144); Function of homologous gene experimentally demonstrated in an other organism; regulator. (144 aa)    
Predicted Functional Partners:
XM1_1850
Two-component system, cell cycle sensor histidine kinase PleC; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 0.987
XM1_2189
Putative Signal transduction histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 0.986
XM1_0255
Signal transduction histidine kinase; Function of strongly homologous gene; enzyme.
 0.985
XM1_4772
Signal transduction histidine kinase; Function of strongly homologous gene; enzyme.
 
 
 0.984
XM1_0126
Putative sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.981
XM1_3311
Signal transduction histidine kinase; Function of strongly homologous gene; enzyme.
 
 
 0.980
divK
Polar-differentiation response regulator DivK; Function of strongly homologous gene; regulator.
 
 
0.922
divK-3
Putative Polar-differentiation response regulator DivK; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
0.919
XM1_3707
Signal transduction histidine kinase; Function of strongly homologous gene; enzyme.
 
 0.859
XM1_2130
Putative Signal transduction histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 0.857
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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