STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_1734Conserved protein of unknown function(AAA+ ATPase domain,194-344); Homologs of previously reported genes of unknown function. (412 aa)    
Predicted Functional Partners:
cobS-2
Aerobic cobaltochelatase subunit CobS; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
  
  0.916
cobT-2
Aerobic cobaltochelatase subunit CobT(Cobalt chelatase, CobT subunit,19-618); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
    
 0.910
cobN
Aerobic cobaltochelatase subunit CobN; Function of strongly homologous gene; enzyme.
     
 0.905
cobB
Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
     
 0.901
cobB-3
Cobyrinic acid A,C-diamide synthase（Cobyrinic acid a,c-diamide synthase CbiA,10-456） Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
     
 0.901
cobO
Cob(I)yrinic acid a,c-diamide adenosyltransferase; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids.
     
  0.900
pduO
Corrinoid adenosyltransferase; Function of strongly homologous gene; enzyme; Belongs to the Cob(I)alamin adenosyltransferase family.
     
  0.900
XM1_1735
Protein of unknown function; No homology to any previously reported sequences.
       0.797
XM1_1736
Protein of unknown function; No homology to any previously reported sequences.
       0.533
XM1_1733
Protein of unknown function; No homology to any previously reported sequences.
       0.491
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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