STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_1767Putative cell wall amidase and lipoprotein (N-acetylmuramoyl-L-alanine amidase domain,4-163); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (226 aa)    
Predicted Functional Partners:
XM1_1768
O-acetylserine/cysteine efflux transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
       0.828
nagZ
Beta-N-acetylhexosaminidase; Function of strongly homologous gene; enzyme.
 
  
 0.772
uup
ABC transport system ATP-binding/permease protein; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
    0.641
XM1_1478
Putative Sensor protein gacS(CheY-like superfamily,782-900;905-1026;1045-1177); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
   
 0.536
ampG
Permease of the major facilitator superfamily, AmpG-like; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
   
 0.525
anmK
Anhydro-N-acetylmuramic acid kinase; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.
  
   
 0.499
XM1_0372
Putative phosphotransferase related to Ser/Thr protein kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
   
 0.492
XM1_1770
Putative hemerythrin-like metal-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process.
       0.463
XM1_0373
N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase; Function of strongly homologous gene; enzyme.
  
     0.459
XM1_3188
PG_binding_1 domain-containing protein; Homologs of previously reported genes of unknown function.
  
  
 0.411
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.