STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_1819Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (291 aa)    
Predicted Functional Partners:
XM1_1818
Alpha-E domain-containing protein; Homologs of previously reported genes of unknown function.
 
  
 0.977
XM1_1815
Homologs of previously reported genes of unknown function.
  
 0.950
XM1_1816
Conserved protein of unknown function(Circularly permuted ATPgrasp domain,89-420); Homologs of previously reported genes of unknown function.
 
  
 0.933
XM1_1817
TGc domain-containing protein; Homologs of previously reported genes of unknown function.
 
    
0.834
XM1_1820
Putative glutamate and aspartate transporter subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.689
gltK
Glutamate and aspartate transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter.
       0.689
gltL
Glutamate/aspartate transport protein (ABC superfamily, atp_bind) (ABC transporter-like,41-165); Function of homologous gene experimentally demonstrated in an other organism; transporter.
       0.689
XM1_4606
Proteasome-type protease; Function of strongly homologous gene; enzyme.
 
    0.624
XM1_1823
Membrane protein of unknown function（Protein of unknown function DUF4239,56-249） No homology to any previously reported sequences.
       0.486
phaZ
Putative SOS mutagenesis and repair protein UmuD (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
     
 0.403
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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