Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| XM1_1080 | gltL | XM1_1080 | XM1_1822 | Putative ABC-type multidrug transport system; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | Glutamate/aspartate transport protein (ABC superfamily, atp_bind) (ABC transporter-like,41-165); Function of homologous gene experimentally demonstrated in an other organism; transporter. | 0.710 |
| XM1_1817 | XM1_1818 | XM1_1817 | XM1_1818 | TGc domain-containing protein; Homologs of previously reported genes of unknown function. | Alpha-E domain-containing protein; Homologs of previously reported genes of unknown function. | 0.975 |
| XM1_1817 | XM1_1819 | XM1_1817 | XM1_1819 | TGc domain-containing protein; Homologs of previously reported genes of unknown function. | Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.834 |
| XM1_1817 | XM1_1820 | XM1_1817 | XM1_1820 | TGc domain-containing protein; Homologs of previously reported genes of unknown function. | Putative glutamate and aspartate transporter subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.634 |
| XM1_1817 | gltK | XM1_1817 | XM1_1821 | TGc domain-containing protein; Homologs of previously reported genes of unknown function. | Glutamate and aspartate transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter. | 0.634 |
| XM1_1817 | gltL | XM1_1817 | XM1_1822 | TGc domain-containing protein; Homologs of previously reported genes of unknown function. | Glutamate/aspartate transport protein (ABC superfamily, atp_bind) (ABC transporter-like,41-165); Function of homologous gene experimentally demonstrated in an other organism; transporter. | 0.634 |
| XM1_1818 | XM1_1817 | XM1_1818 | XM1_1817 | Alpha-E domain-containing protein; Homologs of previously reported genes of unknown function. | TGc domain-containing protein; Homologs of previously reported genes of unknown function. | 0.975 |
| XM1_1818 | XM1_1819 | XM1_1818 | XM1_1819 | Alpha-E domain-containing protein; Homologs of previously reported genes of unknown function. | Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.977 |
| XM1_1818 | XM1_1820 | XM1_1818 | XM1_1820 | Alpha-E domain-containing protein; Homologs of previously reported genes of unknown function. | Putative glutamate and aspartate transporter subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.689 |
| XM1_1818 | gltK | XM1_1818 | XM1_1821 | Alpha-E domain-containing protein; Homologs of previously reported genes of unknown function. | Glutamate and aspartate transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter. | 0.690 |
| XM1_1818 | gltL | XM1_1818 | XM1_1822 | Alpha-E domain-containing protein; Homologs of previously reported genes of unknown function. | Glutamate/aspartate transport protein (ABC superfamily, atp_bind) (ABC transporter-like,41-165); Function of homologous gene experimentally demonstrated in an other organism; transporter. | 0.697 |
| XM1_1819 | XM1_1817 | XM1_1819 | XM1_1817 | Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | TGc domain-containing protein; Homologs of previously reported genes of unknown function. | 0.834 |
| XM1_1819 | XM1_1818 | XM1_1819 | XM1_1818 | Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Alpha-E domain-containing protein; Homologs of previously reported genes of unknown function. | 0.977 |
| XM1_1819 | XM1_1820 | XM1_1819 | XM1_1820 | Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Putative glutamate and aspartate transporter subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.689 |
| XM1_1819 | gltK | XM1_1819 | XM1_1821 | Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Glutamate and aspartate transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter. | 0.689 |
| XM1_1819 | gltL | XM1_1819 | XM1_1822 | Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Glutamate/aspartate transport protein (ABC superfamily, atp_bind) (ABC transporter-like,41-165); Function of homologous gene experimentally demonstrated in an other organism; transporter. | 0.689 |
| XM1_1820 | XM1_1817 | XM1_1820 | XM1_1817 | Putative glutamate and aspartate transporter subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | TGc domain-containing protein; Homologs of previously reported genes of unknown function. | 0.634 |
| XM1_1820 | XM1_1818 | XM1_1820 | XM1_1818 | Putative glutamate and aspartate transporter subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Alpha-E domain-containing protein; Homologs of previously reported genes of unknown function. | 0.689 |
| XM1_1820 | XM1_1819 | XM1_1820 | XM1_1819 | Putative glutamate and aspartate transporter subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.689 |
| XM1_1820 | XM1_3111 | XM1_1820 | XM1_3111 | Putative glutamate and aspartate transporter subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Amino acid ABC transporter periplasmic protein; Function of strongly homologous gene; transporter. | 0.557 |
page 1 of 3