STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_1828Conserved protein of unknown function(Glycosyl transferase, family 1,18-272); Homologs of previously reported genes of unknown function. (317 aa)    
Predicted Functional Partners:
XM1_1829
Putative antisigma-factor antagonist STAS（STAS domain,1-99） Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
       0.773
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.632
XM1_1830
Phosphoserine phosphatase RsbU/P; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
     0.615
XM1_2759
Homologs of previously reported genes of unknown function.
 
  
 0.591
XM1_3197
B30.2/SPRY domain-containing protein; Homologs of previously reported genes of unknown function.
  
     0.563
XM1_2364
Homologs of previously reported genes of unknown function.
  
     0.539
XM1_4304
Conserved protein of unknown function (Concanavalin A-like lectin/glucanases superfamily; Homologs of previously reported genes of unknown function.
  
   
 0.520
XM1_1053
Nucleoside-diphosphate-sugar pyrophosphorylase(2-242); Function of strongly homologous gene; enzyme.
 
  
 0.518
XM1_1275
Conserved protein of unknown function（NERD,16-109） Homologs of previously reported genes of unknown function.
  
 
 
 0.512
XM1_2360
Putative CheY-like receiver; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
  
     0.498
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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