STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_1838Transport permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (261 aa)    
Predicted Functional Partners:
XM1_1839
Putative ABC-type multidrug transport system, ATPase component (ABC transporter-lik,53-173); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
  
 0.975
cobB-3
Cobyrinic acid A,C-diamide synthase（Cobyrinic acid a,c-diamide synthase CbiA,10-456） Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
  
    0.657
XM1_1841
Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.655
XM1_1079
Putative ABC-type multidrug transport system(ABC transporter-like,46-164); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.644
XM1_0406
Putative transporter subunit: ATP-binding component of ABC superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
  
 0.614
XM1_3185
Protein of unknown function; No homology to any previously reported sequences.
  
     0.590
XM1_0824
Homologs of previously reported genes of unknown function.
  
     0.581
XM1_1842
Putative SAM-dependent methyltransferase(Methyltransferase type 12,49-144); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.538
XM1_4470
Putative ABC transporter, ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
  
 0.534
rutE
Oxidoreductase subunit of the alternative pyrimidine degradation pathway; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
  
 0.527
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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