STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_1885Conserved protein of unknown function(Ferritin-related,3-149); Homologs of previously reported genes of unknown function. (168 aa)    
Predicted Functional Partners:
XM1_2900
Putative 2-oxoglutarate ferredoxin oxidoreductase alpha subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.763
XM1_0317
Homologs of previously reported genes of unknown function.
  
     0.654
XM1_2901
Putative 2-oxoglutarate ferredoxin oxidoreductase beta subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.611
XM1_1898
Putative glycosyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.609
XM1_1044
Conserved protein of unknown function(3;342); Homologs of previously reported genes of unknown function.
  
     0.580
XM1_1213
Conserved protein of unknown function（NAD(P)-binding domain,449-619） Homologs of previously reported genes of unknown function.
 
 
 
 0.555
XM1_1964
Homologs of previously reported genes of unknown function.
  
     0.530
rarD
Chloramphenicol resistance permease(RarD protein,7-258); Function of strongly homologous gene; transporter.
       0.508
XM1_0251
Homologs of previously reported genes of unknown function.
  
     0.497
XM1_1886
Two-component system, NarL family, nitrate/nitrite response regulator NarL; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
       0.489
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.