STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_1892Homologs of previously reported genes of unknown function. (347 aa)    
Predicted Functional Partners:
XM1_1893
Protein of unknown function(Domain of unknown function DUF59,4-78); No homology to any previously reported sequences.
 
   
 0.948
XM1_4515
Homologs of previously reported genes of unknown function.
 
     0.632
XM1_1894
Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.594
XM1_1895
Putative dihydroorotase(Dihydroorotase,21-426); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.594
XM1_0564
Porin; Homologs of previously reported genes of unknown function.
  
     0.579
XM1_1699
Homologs of previously reported genes of unknown function.
 
   
 0.548
XM1_1881
Putative Membrane-fusion protein(RND efflux pump, membrane fusion protein,260-519); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
   
 0.540
XM1_1896
Putative asparagine synthase(Asparagine synthase, glutamine-hydrolyzing,2-507); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.531
XM1_1897
Putative glycosyltransferase(Glycosyl transferase, family 1,159-317); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.519
XM1_1898
Putative glycosyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.519
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.