STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_1896Putative asparagine synthase(Asparagine synthase, glutamine-hydrolyzing,2-507); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (586 aa)    
Predicted Functional Partners:
argG
Argininosuccinate synthase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
   
 0.913
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
 
 0.911
pyrB
Aspartate carbamoyltransferase(Aspartate/ornithine carbamoyltransferase,3-313); Function of strongly homologous gene; enzyme; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
  
 
 0.909
aatA
Protein of unknown function (RecA-family ATPase 148-208); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
    
 0.904
nadB
Quinolinate synthase, L-aspartate oxidase (B protein) subunit(L-aspartate oxidase,8-515); Catalyzes the oxidation of L-aspartate to iminoaspartate.
     
  0.900
XM1_1897
Putative glycosyltransferase(Glycosyl transferase, family 1,159-317); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
   
 0.875
lysC
Aspartokinase II alpha subunit (aa 1->408) and beta subunit (aa 246->408); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the aspartokinase family.
  
 
 0.863
panD
Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
     
  0.800
XM1_1898
Putative glycosyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
     
 0.791
XM1_1895
Putative dihydroorotase(Dihydroorotase,21-426); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
     
 0.752
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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