STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kamALysine 2,3-aminomutase（Lysine-2,3-aminomutase-related, 7-322） Function of homologous gene experimentally demonstrated in an other organism; enzyme. (343 aa)    
Predicted Functional Partners:
XM1_1908
Putative Truncated possibly inactive lysyl-tRNA synthetase (Lysyl-tRNA synthetase-related 20-343); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.920
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
     
 0.806
efp
Elongation factor P（Translation elongation factor P,3-185） Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
     
 0.679
XM1_2568
Putative MCP methyltransferase/methylesterase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
   0.629
cheR
Chemotaxis protein methyltransferase 1(MCP methyltransferase, CheR-type,3-266); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
    
   0.617
XM1_1477
Putative methyltransferase Cher3(MCP methyltransferase, CheR-type,10-273); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
    
   0.617
cheR-2
Chemotaxis protein methyltransferase CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.
    
   0.617
XM1_2670
Putative Methylase of chemotaxis methyl-accepting protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
    
   0.617
suhB
Inositol monophosphatase（Inositol monophosphatase,7-264） Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the inositol monophosphatase superfamily.
       0.584
XM1_1913
Putative membrane protein（Outer membrane protein, OmpA/MotB, C-terminal,316-398） Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.
   
   0.497
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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