STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_1928Homologs of previously reported genes of unknown function. (525 aa)    
Predicted Functional Partners:
XM1_1927
Conserved protein of unknown function, containing methyltransferase type 11; No homology to any previously reported sequences.
       0.773
XM1_1929
Putative protein parA (CobQ/CobB/MinD/ParA nucleotide binding domain,6-168); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
       0.628
XM1_1930
Homologs of previously reported genes of unknown function.
       0.628
nudF
ADP-ribose pyrophosphatase(NUDIX hydrolase domain,3-197); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.628
XM1_1925
Ald_Xan_dh_C domain-containing protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.554
pucE
Xanthine dehydrogenase, iron-sulfur subunit([2Fe-2S]-binding,85-160); Function of strongly homologous gene; enzyme.
       0.554
ytkP
Cysteine synthase-like protein; Function of strongly homologous gene; enzyme.
       0.431
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.