STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_1929Putative protein parA (CobQ/CobB/MinD/ParA nucleotide binding domain,6-168); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. (214 aa)    
Predicted Functional Partners:
XM1_1930
Homologs of previously reported genes of unknown function.
       0.784
nudF
ADP-ribose pyrophosphatase(NUDIX hydrolase domain,3-197); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.784
parB-2
Chromosome-partitioning protein ParB; Function of homologous gene experimentally demonstrated in an other organism; factor; Belongs to the ParB family.
 
 
 0.742
XM1_2668
Conserved protein of unknown function (putative ATPase involved in chromosome partitioning); Homologs of previously reported genes of unknown function.
  
   
 0.655
XM1_2187
Putative Chromosome partitioning ATPase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
  
   
 0.634
XM1_1928
Homologs of previously reported genes of unknown function.
       0.628
XM1_1927
Conserved protein of unknown function, containing methyltransferase type 11; No homology to any previously reported sequences.
     
 0.627
XM1_0038
Putative dna modification methylase protein (phage related); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the N(4)/N(6)-methyltransferase family.
  
 
 0.579
parB
Plasmid partitioning protein; Function of strongly homologous gene; enzyme.
  
 
 0.538
cobS-2
Aerobic cobaltochelatase subunit CobS; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
    
 0.528
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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