STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_1933Conserved protein of unknown function (putative Spore maturation protein A); Homologs of previously reported genes of unknown function; 1548223. (411 aa)    
Predicted Functional Partners:
XM1_1932
Putative Membrane protein TerC（Integral membrane protein TerC,13-191）） Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
    0.785
dacC
D-alanyl-D-alanine carboxypeptidase; Function of strongly homologous gene; enzyme; Belongs to the peptidase S11 family.
 
  
 0.757
XM1_1351
D-alanyl-D-alanine carboxypeptidase(Beta-lactamase/transpeptidase-like, 14-271); Function of strongly homologous gene; enzyme; Belongs to the peptidase S11 family.
 
  
 0.753
XM1_3053
Putative D-alanyl-D-alanine carboxypeptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the peptidase S11 family.
 
  
 0.747
XM1_3290
Peptidase M50; Function of strongly homologous gene; enzyme.
  
  
 0.731
XM1_1214
Conserved membrane protein of unknown function（Nucleoside recognition Gate,21-113） Homologs of previously reported genes of unknown function.
  
  
 0.702
XM1_2911
Conserved protein of unknown function (Sporulation stage V, protein R 12-453); Homologs of previously reported genes of unknown function.
  
  
 0.559
XM1_1934
Homologs of previously reported genes of unknown function.
       0.548
alr
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
     
 0.460
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
     
 0.457
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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