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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_1957Putative BadM/Rrf2 family transcriptional regulator (Transcription regulator Rrf2-like,5-143); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (179 aa)    
Predicted Functional Partners:
XM1_1956
Conserved protein of unknown function（Carboxymuconolactone decarboxylase,13-94） Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
 
     0.750
XM1_4138
Putative transcriptional regulator, Rrf2 family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
   
 0.669
nsrR-2
DNA-binding transcriptional regulator（Transcription regulator Rrf2-like,7-138） Function of strongly homologous gene; regulator.
  
     0.608
XM1_1958
Homologs of previously reported genes of unknown function.
       0.545
nsrR
HTH-type transcriptional regulator nsrR（Transcription regulator Rrf2-like,1-128） Function of strongly homologous gene; regulator.
  
     0.538
nifS
Cysteine desulfurase; Function of strongly homologous gene; enzyme.
  
  
 0.499
iscS
Cysteine desulfurase (tRNA sulfurtransferase), PLP-dependent; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.
  
  
 0.499
XM1_1167
Putative Transcriptional regulator(Transcription regulator Rrf2-like,5-131); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
   
 0.494
XM1_4293
Putative HTH-type transcriptional regulator BadM; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
     0.458
XM1_1959
Homologs of previously reported genes of unknown function.
       0.450
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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