STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_1963Homologs of previously reported genes of unknown function. (111 aa)    
Predicted Functional Partners:
XM1_1962
Homologs of previously reported genes of unknown function.
       0.784
XM1_3970
Protein of unknown function; No homology to any previously reported sequences.
  
     0.643
yciB
Intracellular septation protein involved in cell division(ntracellular septation protein A,14-187); Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.
 
     0.601
XM1_1964
Homologs of previously reported genes of unknown function.
       0.593
XM1_2783
Putative Fe-S cluster formation NifU-like protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.572
XM1_1321
Homologs of previously reported genes of unknown function.
  
     0.553
XM1_4215
Homologs of previously reported genes of unknown function; Belongs to the UPF0262 family.
  
     0.547
XM1_1460
Putative Hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.524
XM1_0555
Putative Universal stress protein UspA-like nucleotide-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
  
     0.505
XM1_0556
Homologs of previously reported genes of unknown function.
  
     0.499
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.