STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_1969Conserved protein of unknown function(Dinitrogenase iron-molybdenum cofactor biosynthesis,1-114); Homologs of previously reported genes of unknown function. (126 aa)    
Predicted Functional Partners:
XM1_1970
Protein of unknown function; No homology to any previously reported sequences.
       0.773
XM1_3933
Ferredoxin; Function of homologous gene experimentally demonstrated in an other organism; carrier.
 
  
 0.688
nifQ
NifQ protein,Protein involved in biosynthesis of iron-molybdenum cofactor of nitrogenase; Function of homologous gene experimentally demonstrated in an other organism; factor.
 
  
 0.652
nifQ-3
NifQ protein,Protein involved in biosynthesis of iron-molybdenum cofactor of nitrogenase; Function of strongly homologous gene; factor.
 
  
 0.619
draT
NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
    0.607
XM1_1175
Conserved membrane protein of unknown function(Cytochrome c domain,167-278); Homologs of previously reported genes of unknown function.
 
     0.580
esrB
Function of strongly homologous gene; regulator.
       0.577
nifQ-2
NifQ protein,Protein involved in biosynthesis of iron-molybdenum cofactor of nitrogenase; Function of strongly homologous gene; factor.
  
     0.528
nifH
Nitrogenase iron protein, nifH; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
  
  
 0.502
nifW
Nitrogenase-stabilizing/protective protein NifW; Function of homologous gene experimentally demonstrated in an other organism; factor.
 
  
 0.459
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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