XM1_1976 protein (Magnetospirillum sp. XM1) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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[Homology]

Score

XM1_1976

Homologs of previously reported genes of unknown function. (94 aa)

Predicted Functional Partners:

XM1_1977

0.773

XM1_0596

0.604

XM1_1978

0.522

XM1_1979

0.522

XM1_3526

0.514

XM1_2783

0.406

Your Current Organism:

Magnetospirillum sp. XM1

NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
XM1_0596	XM1_1976	Homologs of previously reported genes of unknown function.	Homologs of previously reported genes of unknown function.	0.604
XM1_0596	XM1_3526	Homologs of previously reported genes of unknown function.	Ribonuclease T2; Function of strongly homologous gene; enzyme; Belongs to the RNase T2 family.	0.507
XM1_1976	XM1_0596	Homologs of previously reported genes of unknown function.	Homologs of previously reported genes of unknown function.	0.604
XM1_1976	XM1_1977	Homologs of previously reported genes of unknown function.	Homologs of previously reported genes of unknown function.	0.773
XM1_1976	XM1_1978	Homologs of previously reported genes of unknown function.	Putative ABC transporter（ABC transporter, substrate-binding protein,45-321） Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	0.522
XM1_1976	XM1_1979	Homologs of previously reported genes of unknown function.	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.522
XM1_1976	XM1_2783	Homologs of previously reported genes of unknown function.	Putative Fe-S cluster formation NifU-like protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.406
XM1_1976	XM1_3526	Homologs of previously reported genes of unknown function.	Ribonuclease T2; Function of strongly homologous gene; enzyme; Belongs to the RNase T2 family.	0.514
XM1_1977	XM1_1976	Homologs of previously reported genes of unknown function.	Homologs of previously reported genes of unknown function.	0.773
XM1_1977	XM1_1978	Homologs of previously reported genes of unknown function.	Putative ABC transporter（ABC transporter, substrate-binding protein,45-321） Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	0.534
XM1_1977	XM1_1979	Homologs of previously reported genes of unknown function.	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.534
XM1_1978	XM1_1976	Putative ABC transporter（ABC transporter, substrate-binding protein,45-321） Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	Homologs of previously reported genes of unknown function.	0.522
XM1_1978	XM1_1977	Putative ABC transporter（ABC transporter, substrate-binding protein,45-321） Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	Homologs of previously reported genes of unknown function.	0.534
XM1_1978	XM1_1979	Putative ABC transporter（ABC transporter, substrate-binding protein,45-321） Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.794
XM1_1979	XM1_1976	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Homologs of previously reported genes of unknown function.	0.522
XM1_1979	XM1_1977	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Homologs of previously reported genes of unknown function.	0.534
XM1_1979	XM1_1978	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Putative ABC transporter（ABC transporter, substrate-binding protein,45-321） Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	0.794
XM1_2783	XM1_1976	Putative Fe-S cluster formation NifU-like protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Homologs of previously reported genes of unknown function.	0.406
XM1_3526	XM1_0596	Ribonuclease T2; Function of strongly homologous gene; enzyme; Belongs to the RNase T2 family.	Homologs of previously reported genes of unknown function.	0.507
XM1_3526	XM1_1976	Ribonuclease T2; Function of strongly homologous gene; enzyme; Belongs to the RNase T2 family.	Homologs of previously reported genes of unknown function.	0.514