STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_1981Homologs of previously reported genes of unknown function. (85 aa)    
Predicted Functional Partners:
XM1_1982
Putative non-ribosomal peptide synthetase(Non-ribosomal peptide synthetase C-terminal,627-1318); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the ATP-dependent AMP-binding enzyme family.
 
     0.801
XM1_1983
Putative Phosphopantetheinyl transferase(4'-phosphopantetheinyl transferase,81-181); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the P-Pant transferase superfamily.
       0.784
XM1_0556
Homologs of previously reported genes of unknown function.
  
     0.675
XM1_0129
Homologs of previously reported genes of unknown function.
  
     0.671
XM1_4215
Homologs of previously reported genes of unknown function; Belongs to the UPF0262 family.
  
     0.641
XM1_0555
Putative Universal stress protein UspA-like nucleotide-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
  
     0.626
secE
Putative Protein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
     0.585
XM1_1984
Uncharacterized protein; Homologs of previously reported genes of unknown function.
       0.576
XM1_3134
Protein of unknown function; No homology to any previously reported sequences.
  
     0.574
XM1_1985
Homologs of previously reported genes of unknown function.
       0.572
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.